Insertion junction: CLIP2.070945_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070945
Chromosome:chromosome 2
Location:6489417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388750 TEF21 (1 of 1) PTHR11200:SF170 - PHOSPHOINOSITIDE PHOSPHATASE SAC1; Phosphoinositide phosphatase 3'UTR
Cre09.g388800 GDH1 Glutamate dehydrogenase; (1 of 2) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCATTTGTTGACGCACGGCCGCACGGGACTTCAGTGCGGCGTGCTTT
Internal bar code:GCTTTATAAGCATGATAAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3538
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCACCTGGTCAACAAGC
Suggested primer 2:CACCCCATCCTACCCCCTTA