Insertion junction: CLIP2.070947_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070947
Chromosome:chromosome 6
Location:6402675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGCCGCCGGAGCCTCATCATCATCACGAGCCGACGGGTCCGTCCTC
Internal bar code:AGAACTTTATGTTACTGTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGTACGGGTTTGCTGATG
Suggested primer 2:GCAAAGCCCTTCGAAAGCAA