Insertion junction: CLIP2.070947_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070947
Chromosome:chromosome 17
Location:244481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697550 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAACTGACCTGCATCGCTGTCGCCCTCGCCTCACCAACGCAGGACCGT
Internal bar code:GACATCCCAGTCGCGCGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:193
LEAP-Seq percent confirming:2.94118
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAGGGAGATGGGGTTGG
Suggested primer 2:CTTTGTTCTTCCACAGGCGC