Insertion junction: CLIP2.070947_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070947
Chromosome:chromosome 17
Location:244483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697550 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTGAACATGAATGAAGCAGCAGGCAAAGCAGTGTCAATGCAGCAGGC
Internal bar code:GACATCCCAGTCGCGCGATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGTTCTTCCACAGGCGC
Suggested primer 2:GACAAGGGAGATGGGGTTGG