Insertion junction: CLIP2.070949_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070949
Chromosome:chromosome 10
Location:842619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423400 (1 of 2) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGAAGGCGTGGAAGCGTGGTGTTCAACGCAGGCGTGAATGGAGTGAA
Internal bar code:AAAAGCGATAGTAAGTGGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:867
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTGAGGATATCGACGC
Suggested primer 2:TCAACCGCCACAATCTTGGT