Insertion junction: CLIP2.070949_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070949
Chromosome:chromosome 10
Location:842648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423400 (1 of 2) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGCAAAATGCTTCGACGTCTCACATGGCATTTGCAAGCAAATGATT
Internal bar code:AAAAGCGATAGTAAGTGGATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2976
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACCGCCACAATCTTGGT
Suggested primer 2:CCTGGTGAGGATATCGACGC