Insertion junction: CLIP2.070951_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070951
Chromosome:chromosome 16
Location:1137572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649950 HFO24,HFO40 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATCTGAGCTTCCGGCATCTTCTACACCCGCCTATCCAGCTCGCTCGCC
Internal bar code:CTAATGTGAGAGGAGGGGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2378
LEAP-Seq percent confirming:65.9574
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGAAGTTCCCGATATCA
Suggested primer 2:TCCTTGGGCATGATGGTCAC