Insertion junction: CLIP2.070952_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070952
Chromosome:plastome
Location:78852
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802296 2717032,ycf8,psbT,ChreCp031 photosystem II protein T; (1 of 1) K02718 - photosystem II PsbT protein (psbT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAAAGTATATACTAAAGCTTCCATAAAAAGTAAAATGTATTTTGATT
Internal bar code:ATTAGTTCAAAATGCGCATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:150
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACGATCTTCCGTGACGT
Suggested primer 2:CTGGTCGGGCAAGTAAACCT