Insertion junction: CLIP2.070962_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070962
Chromosome:chromosome 12
Location:6626827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539000 ECT1 (1 of 1) 2.7.7.14 - Ethanolamine-phosphate cytidylyltransferase / Phosphorylethanolamine transferase; CDP-Ethanolamine synthase 3'UTR
Cre12.g539050 (1 of 1) IPR000363//IPR016159 - Alpha 1D adrenoceptor // Cullin repeat-like-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCTCATTTCATCACACTCTGTAAGATGATAATGCACCACCTTTCACG
Internal bar code:AAGGATGTGTTCGGTGTGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1340
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGATGACGACGATTTGC
Suggested primer 2:TCGTATGTGGCTATGGCGTC