Insertion junction: CLIP2.070962_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070962
Chromosome:chromosome 12
Location:6626829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539000 ECT1 (1 of 1) 2.7.7.14 - Ethanolamine-phosphate cytidylyltransferase / Phosphorylethanolamine transferase; CDP-Ethanolamine synthase 3'UTR
Cre12.g539050 (1 of 1) IPR000363//IPR016159 - Alpha 1D adrenoceptor // Cullin repeat-like-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATACAGTGTCCGTAAATCCGTTTGTGTCGTCTAAACGGTACGGTACGC
Internal bar code:AAGGATGTGTTCGGTGTGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4033
LEAP-Seq percent confirming:89.011
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTATGTGGCTATGGCGTC
Suggested primer 2:GAGCGATGACGACGATTTGC