Insertion junction: CLIP2.070969_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070969
Chromosome:chromosome 12
Location:5157704
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g526800 GND1 (1 of 1) 1.1.1.44 - Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) / Phosphogluconic acid dehydrogenase; 6-phosphogluconate dehydrogenase, decarboxylating 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCCTGCCTAGTGCACCTCCTTCACGTGCTCCATGCGAGTTGCCCTGC
Internal bar code:CGGCTCAGGAGTACCGGGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:560
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCGTTCCCAATAAGCATG
Suggested primer 2:AGGAGAGCAGTGTGATGTGC