Insertion junction: CLIP2.070971_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070971
Chromosome:chromosome 1
Location:7033206
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g050316 (1 of 4) PTHR11229:SF5 - 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAATGCCAGAGGCGGGGCGGGGACCTGGAGGCTGGGGCATGCAAGTG
Internal bar code:AGCTATTCTCTTGATAAGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2352
LEAP-Seq percent confirming:22.7273
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCCACAGTACCACGATG
Suggested primer 2:GAGGAAAGTGGGGTAGTGGC