Insertion junction: CLIP2.070974_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070974
Chromosome:chromosome 2
Location:3836573
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g101150 (1 of 2) IPR000104//IPR000210//IPR011333 - Antifreeze protein, type I // BTB/POZ domain // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTCTTAGCCGCGGTCGGGCTGCAAAGGGCTGCTTGCATGTCACTGCC
Internal bar code:TGGGCCATTCACGCTGCGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:998
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTCCGAGCGCTCTACAAG
Suggested primer 2:CACCTCTCTCCTCCTCTCCC