Insertion junction: CLIP2.070992_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070992
Chromosome:chromosome 11
Location:4096228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481104 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGATTGTAACCCCCCCCCCCCTAGCCCAGCTGCCGAGCTGCGCCCACC
Internal bar code:AGTCGCGGGAAGGAAGGCTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:430
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAAAGAGGAGGAGGGGACGG
Suggested primer 2:CTATTGCCTACGCCGCCTTA