Insertion junction: CLIP2.070993_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070993
Chromosome:chromosome 7
Location:1875570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800786 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGTGTGAGAAGGCAAGCAGTTGTCTCCATTAGCACGGGGAGCGTGGGC
Internal bar code:ACATGATGATGCTATACATCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1186
LEAP-Seq percent confirming:92.1053
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGGCAGTTGATGTACA
Suggested primer 2:GTCGATTCGTAGCAAACCGC