Insertion junction: CLIP2.070994_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070994
Chromosome:chromosome 17
Location:2432193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714800 ISG6,ISG-C3 (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAAACAGCTGGGCGTGTAACCCCTTGCGGGCTTGGTGAGGCGCTCTC
Internal bar code:GGGCGGAGTGGTGCCATCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5234
LEAP-Seq percent confirming:86.8687
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCAGCTAGATACAGCCCA
Suggested primer 2:CCCACTGACTTCGTCACGAA