Insertion junction: CLIP2.070994_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070994
Chromosome:chromosome 17
Location:2432193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714800 ISG6,ISG-C3 (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCGCCCTGATCCCTAACCATTCGTTGTTTGTAATCTTATACAGGCGC
Internal bar code:CAAATATGAACTGCCGTGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACTGACTTCGTCACGAA
Suggested primer 2:ACCCAGCTAGATACAGCCCA