Insertion junction: CLIP2.070996_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070996
Chromosome:chromosome 6
Location:4255056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278253 (1 of 44) IPR000048 - IQ motif, EF-hand binding site 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCTCCACATGACACACAACTTGGCACTTTAGTCAACAGGACGCACAG
Internal bar code:CTTAATGAGAGTTTTTTACTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1000
LEAP-Seq percent confirming:79.0123
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTATCGATGTGCGTGTGC
Suggested primer 2:TGTAACGGGACAAGCTGGTC