Insertion junction: CLIP2.071004_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071004
Chromosome:chromosome 1
Location:677590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003800 (1 of 112) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK; MAP kinase kinase kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGGTCAGATTTTAACTACCATAAAATTGCCCTGAGCGACCTTGCAA
Internal bar code:ATAGTAGTCGTGGCTTACTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1050
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGAAACCTGCCCCTAGTCAG
Suggested primer 2:AGAACGGCTCATGTCAAGGG