Insertion junction: CLIP2.071009_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071009
Chromosome:chromosome 9
Location:6697666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416900 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCTGTGCCCCCGCAACCACACTGATCGCGCACATCAGTCACGGACTA
Internal bar code:TTGTCCAATTGTAACTTAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1571
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTTGTCAACGCAGGCAGG
Suggested primer 2:GGGCTGCCTGGTATTGTTCT