Insertion junction: CLIP2.071013_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071013
Chromosome:chromosome 6
Location:3532330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800658 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACTCGCGAGGTCGCTTCTCGCTCCAGCCGAGTTTTCCCTGCCGCCTA
Internal bar code:CTCTTTACGATTCATTGCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2343
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCTCCTTGTTAGCCAT
Suggested primer 2:TTCAACATGCAAACAGGGCG