Insertion junction: CLIP2.071015_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071015
Chromosome:chromosome 8
Location:3256332
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g377150 (1 of 1) 2.8.3.22 - Succinyl-CoA--L-malate CoA-transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACGGCGCGCTTTCCGCCCTCAAGTCCGCACAGGCTCTCGACATCTGC
Internal bar code:TTTTTTCATGGATATATCTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2056
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGGAAGCATGCTATTG
Suggested primer 2:GGAGCGAAAGTGTTGCAAGG