Insertion junction: CLIP2.071017_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071017
Chromosome:chromosome 8
Location:4131813
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g383450 FIST N domain protein; (1 of 3) PF08495 - FIST N domain (FIST) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGGCGGAGGTCAGCCGAACAGCCCAGCCAGCCCAGCCCAGCCCAGCCC
Internal bar code:ATCGCTCGATCAGGTAATTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:141
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTGTTTGTGTCTGCGGC
Suggested primer 2:GTAGTCCAGCCCCTCCAGTA