Insertion junction: CLIP2.071018_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071018
Chromosome:chromosome 10
Location:196765
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g419000 (1 of 1) PTHR13105//PTHR13105:SF7 - MYELOID LEUKEMIA FACTOR // MYELOID LEUKEMIA FACTOR 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCCTGTTGCAGGGAGTGACTGTAACCCTTTGCCACCCTTTGTCGCGA
Internal bar code:TCCGTTATTTCAACTATGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:37.0968
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:39
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGAAATAGGGGCTGGTG
Suggested primer 2:TAGATGGCTATGCTGTGCGG