Insertion junction: CLIP2.071021_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071021
Chromosome:chromosome 1
Location:5751298
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGATGCAGTCACTCATGTTGACACAGATAGCTGGTGAACAGCGAAAGG
Internal bar code:AACAATCATATGAGCTGATTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1736
LEAP-Seq percent confirming:89.7959
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGCATATGTTGACGCG
Suggested primer 2:TGATTGCTGCGTTTGGGTTG