Insertion junction: CLIP2.071027_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071027
Chromosome:chromosome 10
Location:3094711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441350 5'UTR
Cre10.g441400 NOP58 (1 of 1) K14565 - nucleolar protein 58 (NOP58); Nucleolar protein, Component of C/D snoRNPs 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCGCACTTGCCGCTCACAATCGCGTTTGGCCAGTCCCACATATCCGT
Internal bar code:GCGGACTTCCAGTTAGGTTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4823
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAAGTAGGAACGTGGGGC
Suggested primer 2:TTGCGATACATGTGGTGCCT