Insertion junction: CLIP2.071033_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071033
Chromosome:chromosome 16
Location:6107420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801985 (1 of 1) K10740 - replication factor A3 (RPA3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTTGCTTTGCAAGAACAAACATTCGCAGCTGTCCATATTCTCTTTTT
Internal bar code:TATCGATGTAGTTCACTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2644
LEAP-Seq percent confirming:96.9231
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGTGCGTGTGTCTAGGT
Suggested primer 2:CATCAACGCTGCTTCCGATG