Insertion junction: CLIP2.071034_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071034
Chromosome:chromosome 3
Location:6428940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192950 (1 of 4) 2.7.11.13 - Protein kinase C / PKC 3'UTR
Cre03.g193000 HAD5 Halo-acid dehalogenase-like hydrolase; (1 of 1) 3.1.3.29 - N-acylneuraminate-9-phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGGGGGGGTGGCTCGAGATTAGGTGTACACGTACCAGCAAATGTCGG
Internal bar code:TGCGATATTGTCCGCGCTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4189
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:129
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:129

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTCGGTTTCTCACGCCA
Suggested primer 2:GCATCAGGATAGTCGGCGAA