Insertion junction: CLIP2.071040_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071040
Chromosome:chromosome 7
Location:2511888
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329650 (1 of 1) PTHR23004//PTHR23004:SF7 - DOUBLECORTIN DOMAIN CONTAINING 2 // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACCTTGCATGCGGTAGCGCTCTGCGCGTCGTGCTGCGCGGCGCCGC
Internal bar code:AGCACCCCCGCGATTGTGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:79.1667
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGGCTTACATGTTGCCT
Suggested primer 2:ATCATCACGTACCGATGGCC