Insertion junction: CLIP2.071041_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071041
Chromosome:chromosome 2
Location:4147811
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g103770 3'UTR
Cre02.g103784 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCTGCTAGCCCTGCCGCCGGTGAGCTCACCCTTTCTGTCTGCTCGGT
Internal bar code:CAGGCATAATAACCTTGCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTTGCAACGTCGAGCCG
Suggested primer 2:ACAGGTGCAGACTCAAGACG