Insertion junction: CLIP2.071049_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071049
Chromosome:chromosome 13
Location:3936570
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801566 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTACCGCGGACTCCATACCGGAATACTGACTCGGTTCCCCGGGCAGG
Internal bar code:CCTATTGTTCTTGACGAAAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5712
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGACGCCAGCATAT
Suggested primer 2:AAAGTGTGGAGAGGGCATCG