Insertion junction: CLIP2.071053_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071053
Chromosome:chromosome 16
Location:6073301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g677700 NUP62 Nucleoporin 62; (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGGAAGGGTGTGCGATGCGGGTGATGTGGACAAGCATGTGGACGC
Internal bar code:GTTTGATTGCCTTGCGCAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:852
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTCAGGGGATGGGGTCTG
Suggested primer 2:TTAACCTCTCGTTCGGCCAC