Insertion junction: CLIP2.071063_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071063
Chromosome:chromosome 2
Location:3662910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100100 (1 of 5) PTHR32467//PTHR32467:SF15 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SMZ-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACGCACACAGGGACACAGACCCTCGGCCTCGTGCCGGCGCCACC
Internal bar code:AGGTGGCCACGCGAAGTCTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3557
LEAP-Seq percent confirming:40.458
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:78
LEAP-Seq n unique pos:131

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACGACCCAACGAACGGA
Suggested primer 2:CCTGGCTTGGGATTGGGATT