Insertion junction: CLIP2.071071_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071071
Chromosome:chromosome 16
Location:6666962
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673400 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCGACGACTGTGTGCGTGTTGGGCGGGTGCGTGCGTGCACAAAGACG
Internal bar code:GAAGCCGTGCATAGAACCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:901
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCATGTGGTGATGTGCT
Suggested primer 2:GACTCAACTGGGTGCATGGA