Insertion junction: CLIP2.071071_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071071
Chromosome:chromosome 16
Location:6666969
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673400 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCACAGGCCACAACCACCGGAATCCGTCCTCAACATCACGAACTTGG
Internal bar code:GTTTCATGCTTGCTTTGTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1749
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GACTCAACTGGGTGCATGGA
Suggested primer 2:TCAGCATGTGGTGATGTGCT