Insertion junction: CLIP2.071080_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071080
Chromosome:chromosome 4
Location:1837552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217900 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCTATCAAGAACGCCTATTTTATAGGACCTAGTTAGGTCTCGCGTAAC
Internal bar code:AAATGTTCGACTTGCTAATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGCGTAGATGGGGATGG
Suggested primer 2:CTAGGGATGCGCCAGAGAAG