Insertion junction: CLIP2.071081_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071081
Chromosome:chromosome 6
Location:4787238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279700 (1 of 1) PTHR15535:SF22 - PROTEIN RLIB 3'UTR
Cre06.g279750 MAP1A (1 of 1) PTHR10804//PTHR10804:SF13 - PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P // METHIONINE AMINOPEPTIDASE 1; Methionine aminopeptidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAGGGAACCATGGTTCAGCCTGATTCGGCCCGCCTCACGCTCTACCC
Internal bar code:AGCATAATCATGTTCTTGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2991
LEAP-Seq percent confirming:79.0323
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCTCAGGTTCCAGGTGG
Suggested primer 2:CCCACCACGTATGATACCGG