Insertion junction: CLIP2.071084_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071084
Chromosome:chromosome 4
Location:2787174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223850 DEH1,HEL23 (1 of 1) K12614 - ATP-dependent RNA helicase DDX6/DHH1 (DDX6, RCK, DHH1); Cytoplasmic DExD/H-box RNA helicase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGTTTTTCGTTTACGTGTATGTACTTGATAGCTAGAAGGCCGAGTAAG
Internal bar code:CTTTATGCTACGATGACTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4855
LEAP-Seq percent confirming:81.3333
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGCCATCGTGCCCATT
Suggested primer 2:ACTCTGCACAACACGAGAGG