Insertion junction: CLIP2.071087_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071087
Chromosome:chromosome 3
Location:5595521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185600 OGD3 (1 of 3) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase; Dihydrolipoamide succinyltransferase 5'UTR
Cre03.g185650 CaM-IP4,FAP251 (1 of 1) PTHR13720//PTHR13720:SF13 - WD-40 REPEAT PROTEIN // WD REPEAT-CONTAINING PROTEIN 66; Flagellar Associated Protein 251 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAGGTTTTGGTGCCGGGTTTTGGACACCCATTCAGAACGTAGCTCAT
Internal bar code:GCGGTATTAATAGTATCAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3889
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACATCGGGCATACGCAG
Suggested primer 2:GAGTACGTGGTGCTGTGTGA