Insertion junction: CLIP2.071090_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071090
Chromosome:chromosome 9
Location:2013783
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g396750 CSE18 Predicted protein of CSE family; (1 of 1) IPR000601//IPR022409 - PKD domain // PKD/Chitinase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCATAGACGCACCTCACTGCCAGCCCGCACACGCCACTTGTCGTCTGAG
Internal bar code:GATGGAATGAGGTGTTAGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCCGAGTTCTCCGTCT
Suggested primer 2:CGAGTCCACGGTGTTGAAGA