Insertion junction: CLIP2.071091_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071091
Chromosome:chromosome 13
Location:3471406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g587400 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCCATTGTAGCTATCTGCGCGTTATTCCAAACCAATGCAATCGTGCA
Internal bar code:TAGTTTTTTCTAACGACAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5865
LEAP-Seq percent confirming:98.5916
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACCGGTTACGATGATGC
Suggested primer 2:AAGGAGTGCTGCTTCTGTCC