Insertion junction: CLIP2.071095_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071095
Chromosome:chromosome 16
Location:5831985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679900 XRN3 5' to 3' exoribonuclease; (1 of 1) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACGACTTCCCATTCTGGCGACCGCACGGGAGCCTCAGGTCTGGAAC
Internal bar code:CAAGTCGGTGGACTTTGGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2229
LEAP-Seq percent confirming:96.6102
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACCGAAACTCCACGACA
Suggested primer 2:GGTAACTTCTTCGCGGGGAT