Insertion junction: CLIP2.071095_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071095
Chromosome:chromosome 16
Location:5831985
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679900 XRN3 5' to 3' exoribonuclease; (1 of 1) K12619 - 5'-3' exoribonuclease 2 (XRN2, RAT1) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGTCACTGCCAACCACCAGAAACGGTCCTACGTCGTTTGACACGGAA
Internal bar code:CGGGACCCGAGTCGTCCAATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1992
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAACTTCTTCGCGGGGAT
Suggested primer 2:CTGACCGAAACTCCACGACA