Insertion junction: CLIP2.071104_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071104
Chromosome:chromosome 2
Location:2496414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092000 DEG2 Deg protease; (1 of 5) 3.4.21.108 - HtrA2 peptidase / Serine proteinase OMI 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATCCCGCATGTACATCCCGCGTGCATGGCCCCATTGGCTCCCTCAGCC
Internal bar code:GTTATTAGATCAAACTTATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3328
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TATGTAGGGGAAGGGACGCA
Suggested primer 2:AAATGAATCCGAGCGCATGC