Insertion junction: CLIP2.071105_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071105
Chromosome:chromosome 9
Location:4535147
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g401071 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCAGCAAGCTGGCGGGGGGGTGCTGGAGGGGCCAGAGGCGCAGGAG
Internal bar code:TTTACCAGACATGACATTCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGATCGACAGCCAAGCCG
Suggested primer 2:CATCTGGCAATGTCGGCTTG