Insertion junction: CLIP2.071106_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071106
Chromosome:chromosome 12
Location:2721279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504850 HFO16 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGTCTGGACGCGGCAAGGGCGGCAAGGGCCTGGGCAAGGGCGGCGCT
Internal bar code:GCGGGTTACTCATAAGGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2766
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTGCTCAAGTCTGTGT
Suggested primer 2:TCCTTGGGCATGATGGTCAC