Insertion junction: CLIP2.071106_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071106
Chromosome:chromosome 12
Location:2721290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g504850 HFO16 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGAGGTGAACGAAAGAGGAAGTAGGAAAATGCTTGCTGTTAATAGTC
Internal bar code:ATACGTTTCAAGGTTGGAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2648
LEAP-Seq percent confirming:87.037
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTGGGCATGATGGTCAC
Suggested primer 2:GCCTCTGCTCAAGTCTGTGT