Insertion junction: CLIP2.071107_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071107
Chromosome:chromosome 12
Location:9662198
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g557503 (1 of 5) PF13676 - TIR domain (TIR_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATGCTCGAAATCAGCCGAGGACGAGCCGGGTTGGAGAGATGTAGGGA
Internal bar code:AAACATACGCAAAGCGGTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:291
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACTTGACAGACCCAGG
Suggested primer 2:GCGTGCTGCCTGTTTGTTTA