Insertion junction: CLIP2.071129_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071129
Chromosome:chromosome 1
Location:1014401
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g005950 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCGCGTGCGTAGTATGGCGCGGAGTGTGTAACTTCTCAGCGCGCCAT
Internal bar code:TGTAAGCCCAGTGGAGGCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:422
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGCACTCCCAAGGTTG
Suggested primer 2:ACGGGAATGGGAATGGCAAT