Insertion junction: CLIP2.071131_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071131
Chromosome:chromosome 1
Location:6854192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049132 (1 of 1) PTHR23097//PTHR23097:SF105 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCCAGCATGGCCCAGATCACAAAACACACACGCTACACAGCCGTCGAA
Internal bar code:GACGTATCGGACTTACGAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4163
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTCAAAGTCTGCAACGA
Suggested primer 2:TTCGGCACTCTGTCAGAACC